[Solved]Instantiated item won't get destroyed until "picked up" again.

So I been working on an inventory system on my own (first one I ever done). I have it working where the item gets picked up and placed in the right slot of the list. I also gave the ability to drop the item by pressing 'Q' which also works. My problem is that if I have two items and I drop both, I am able to pick up the first item like normal but the second item I am able to pick up the item but the object doesn't get destroyed until I pick it up again which results in having two of that item instead of one.

This is the code that places item in my inventory:

 if (Physics.Raycast(InteractRay, out hit, InteractDistance))
         {
             //If it hits a fruit collect if there is enough space
             if (hit.collider.tag == "Pickup" && Input.GetKeyDown(KeyCode.E))
             {
                 //if item is in inventory already
                 if (gameObject.GetComponent<Inventory_Script>().HotBar.Contains(hit.transform.GetComponent<Interaction_Item>().Collect()))
                 {
                     //if below inventory max count then collect
                     if (gameObject.GetComponent<Inventory_Script>().HotBarNumberOfItems[gameObject.GetComponent<Inventory_Script>().HotBar.IndexOf(hit.transform.GetComponent<Interaction_Item>().Collect())] < 10)
                     {
                         gameObject.GetComponent<Inventory_Script>().HotBarNumberOfItems[gameObject.GetComponent<Inventory_Script>().HotBar.IndexOf(hit.transform.GetComponent<Interaction_Item>().Collect())] += 1;
                         Destroy(hit.collider.gameObject);
                     }
                 }
                 //if There is space in inventory and item is not already collected, add to inventory
                 else if (!gameObject.GetComponent<Inventory_Script>().HotBar.Contains(hit.transform.GetComponent<Interaction_Item>().Collect()) && gameObject.GetComponent<Inventory_Script>().HotBar.Contains(null))
                 {
                     foreach (GameObject empty in gameObject.GetComponent<Inventory_Script>().HotBar)
                     {
                         if (empty == null)
                         {
                             gameObject.GetComponent<Inventory_Script>().HotBar[gameObject.GetComponent<Inventory_Script>().HotBar.IndexOf(empty)] = hit.transform.gameObject.GetComponent<Interaction_Item>().Collect() as GameObject;
                             gameObject.GetComponent<Inventory_Script>().HotBarNumberOfItems[gameObject.GetComponent<Inventory_Script>().HotBar.IndexOf(empty)-1] += 1;
                             gameObject.GetComponent<Inventory_Script>().showItem();
                             Destroy(hit.collider.gameObject);
                             break;
                         }
                     }
                 }
 
                 if (!gameObject.GetComponent<Inventory_Script>().HotBar.Contains(null))
                 {
                     //if item is in inventory already
                     if (gameObject.GetComponent<Inventory_Script>().Inventory.Contains(hit.transform.GetComponent<Interaction_Item>().Collect()))
                     {
 
                         //if below inventory max count then collect
                         if (gameObject.GetComponent<Inventory_Script>().InventoryNumberOfItems[gameObject.GetComponent<Inventory_Script>().Inventory.IndexOf(hit.transform.GetComponent<Interaction_Item>().Collect())] < 10)
                         {
                             gameObject.GetComponent<Inventory_Script>().InventoryNumberOfItems[gameObject.GetComponent<Inventory_Script>().Inventory.IndexOf(hit.transform.GetComponent<Interaction_Item>().Collect())] += 1;
                             Destroy(hit.transform.gameObject);
                         }
                     }
                     //if There is space in inventory and item is not already collected, add to inventory
                     else if (!gameObject.GetComponent<Inventory_Script>().Inventory.Contains(hit.transform.GetComponent<Interaction_Item>().Collect()) && gameObject.GetComponent<Inventory_Script>().Inventory.Contains(null))
                     {
                         foreach (GameObject empty in gameObject.GetComponent<Inventory_Script>().Inventory)
                         {
                             if (empty == null)
                             {
                                 gameObject.GetComponent<Inventory_Script>().Inventory[gameObject.GetComponent<Inventory_Script>().Inventory.IndexOf(empty)] = hit.transform.gameObject.GetComponent<Interaction_Item>().Collect() as GameObject;
                                 gameObject.GetComponent<Inventory_Script>().InventoryNumberOfItems[gameObject.GetComponent<Inventory_Script>().Inventory.IndexOf(empty)] += 1;
                                 gameObject.GetComponent<Inventory_Script>().showItem();
                                 Destroy(hit.transform.gameObject);
                                 break;
                             }
                         }
                     }
                 }
             }
         }

This is my dropping code:

  //Drop item from inventory
         if (Input.GetKeyDown(KeyCode.Q))
         {
             if (gameObject.GetComponent<Inventory_Script>().HotBarNumberOfItems[InventorySelection] > 0)
             {
                 GameObject Item;
                 Item = Instantiate(gameObject.GetComponent<Inventory_Script>().HotBar[InventorySelection], transform.position, transform.rotation) as GameObject;
                 Item.GetComponent<Rigidbody>().velocity = transform.TransformDirection(Vector3.forward * 3);
                 gameObject.GetComponent<Inventory_Script>().HotBarNumberOfItems[InventorySelection] -= 1;
 
                 if (gameObject.GetComponent<Inventory_Script>().HotBarNumberOfItems[InventorySelection] == 0)
                 {
                     gameObject.GetComponent<Inventory_Script>().HotBar[InventorySelection] = null;
                     gameObject.GetComponent<Inventory_Script>().showItem();
                 }
             }
         }

This is the function Collect() that you see in my inventory code:

 public GameObject Collect()
     {
         return Resources.Load(prefab) as GameObject;
     }

This is the the script Inventory_Script where I create the lists:

 using UnityEngine;
 using System.Collections;
 using System.Collections.Generic;
 
 public class Inventory_Script : MonoBehaviour {
 
     public GameObject Item;
     public List<GameObject> Inventory = new List<GameObject>();
     public List<GameObject> HotBar = new List<GameObject>();
     public List<int> InventoryNumberOfItems = new List<int>();
     public List<int> HotBarNumberOfItems = new List<int>();
 
     // Use this for initialization
     void Start () {
 
         for (int i = 0; i < 10; i++)
         {
             Inventory.Add(null);
             InventoryNumberOfItems.Add(0);
         }
 
         for (int i = 0; i < 5; i++)
         {
             HotBar.Add(null);
             HotBarNumberOfItems.Add(0);
         }
     }
     
     // Update is called once per frame
     void Update () {
     
     }
 
     public void showItem()
     {
         if (gameObject.GetComponent<Inventory_Script>().HotBar[gameObject.GetComponent<Player_Interaction>().InventorySelection] == null)
         {
             Item.GetComponent<MeshFilter>().mesh = null;
         }
         Item.GetComponent<MeshFilter>().mesh = gameObject.GetComponent<Inventory_Script>().HotBar[gameObject.GetComponent<Player_Interaction>().InventorySelection].gameObject.GetComponent<MeshFilter>().sharedMesh;
         Item.GetComponent<MeshRenderer>().material = gameObject.GetComponent<Inventory_Script>().HotBar[gameObject.GetComponent<Player_Interaction>().InventorySelection].gameObject.GetComponent<MeshRenderer>().sharedMaterial;
         Item.transform.localScale = gameObject.GetComponent<Inventory_Script>().HotBar[gameObject.GetComponent<Player_Interaction>().InventorySelection].transform.localScale;
     }
 }

Like I said if I drop both items and pick up the second one, it doesn't get destroyed until I pick it up again giving two instead of one. This happens with any item regardless of type (ex. Apples or Oranges). This can be reproduced easily. Thanks for the help.

P.S Inventory code and dropping code are in update()