GUI Button overlap problem

Below is a complete working example of windowing with control over window focusing.

 #pragma strict
 
 var windowRect0 : Rect = Rect (20, 20, 120, 150);
 var windowRect1 : Rect = Rect (20, 100, 120, 150);
 
 var focusedWindow = 0; // Initially focused window.
 var show= [true,true]; // Initially shown windows.
 var clickOnUnfocused = false; // What style of windowing do you want?
 
 private var closeWindow = -1;
 private var toDraw = 0;
 private var neverFocused = true;
 
 function OnGUI()
 {
     // Need to know how many we draw to work out which is on top.
     toDraw = 0;
     if (show[0]) { toDraw++; windowRect0 = GUILayout.Window (0, windowRect0, DoMyWindow, "Window 0"); }
     if (show[1]) { toDraw++; windowRect1 = GUILayout.Window (1, windowRect1, DoMyWindow, "Window 1"); }
     
     if (neverFocused) {
         // Set initial focus (default is none!!)
         neverFocused = false;
         GUI.FocusWindow(focusedWindow);
     }
     
     if (closeWindow >= 0) {
         // Close if instructed to in DoMyWindow.
         show[closeWindow] = false;
         closeWindow = -1;
     }
 }
 
 function DoMyWindow(windowID : int)
 {
     if (Event.current.type == EventType.Repaint) {
         // Are we the last (top) window, and so the focused one?
         toDraw--;
         if (toDraw == 0)
             focusedWindow = windowID;
     }
     
     // Unfocused windows drawn disabled, and unless clickOnUnfocused also actually disabled.
     if (focusedWindow != windowID && (Event.current.type == EventType.Repaint || !clickOnUnfocused))
         GUI.enabled = false;
     
     if (GUILayout.Button("Close")) {
         // Just register the close, actually do it back in OnGUI, otherwise
         // window closes mid-way through event processing, muddling toDraw.
         Debug.Log("Close "+windowID);
         closeWindow = windowID;
     }
     
     if (GUILayout.Button("Hello")) {
         Debug.Log("Clicked "+windowID);
     }
     
     // Window-specific controls, here just a toggle for clickOnUnfocused.
     if (windowID == 0)
         clickOnUnfocused = GUILayout.Toggle(clickOnUnfocused,"Click On Unfocused");
         
     // Always allow dragging.
     GUI.enabled = true;
     GUI.DragWindow (Rect (0,0,10000,10000));
 }

I guess Unity doesn't enforce any policies like this so that you can implement any style you like. It would be nice though if the API at least had GUI.focusedWindow (as inferred in the code above), since the GUI code clearly knows it, given the visualization.